STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A044QJK5Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
A0A044U2H0
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.945
A0A044TPF9
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.943
A0A044V4D1
Uncharacterized protein.
   
 0.922
A0A044RZ08
Homeobox domain-containing protein.
    
   0.896
A0A044TD44
Uncharacterized protein.
   
 0.885
A0A044SGG7
Small nuclear ribonucleoprotein G.
   
 0.877
A0A044UVA4
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.871
A0A044T100
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.869
A0A044TA51
Uncharacterized protein.
   
 0.868
A0A044U1D0
Small nuclear ribonucleoprotein Sm D3.
   
 0.862
Your Current Organism:
Onchocerca volvulus
NCBI taxonomy Id: 6282
Other names: O. volvulus
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