STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A044QP20DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (859 aa)    
Predicted Functional Partners:
A0A044U2F6
Tudor domain-containing protein.
    
 0.989
A0A044VI55
ERCC4 domain-containing protein.
    
 0.985
A0A044UKD1
DUF1767 domain-containing protein.
    
 0.972
A0A044UB49
DUF1767 domain-containing protein.
    
 0.969
A0A044UWY4
Uncharacterized protein.
  
 0.964
A0A044UB54
RMI1_C domain-containing protein.
    
 0.946
A0A044V544
Uncharacterized protein.
  
 0.939
A0A044VFY4
Uncharacterized protein.
    
 0.929
A0A044VE63
Uncharacterized protein.
   
 0.927
A0A044V469
Uncharacterized protein.
   
 0.915
Your Current Organism:
Onchocerca volvulus
NCBI taxonomy Id: 6282
Other names: O. volvulus
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