STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A044RAM0Uncharacterized protein. (676 aa)    
Predicted Functional Partners:
A0A2K6VXC1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.819
A0A044TM97
CPSF_A domain-containing protein.
    
 0.771
A0A2K6WH89
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.690
A0A044SU88
WD_REPEATS_REGION domain-containing protein.
     
 0.689
A0A044SMM6
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 
  0.683
A0A2K6WK34
Uncharacterized protein.
   
 
  0.659
A0A044U1H7
RING-type domain-containing protein.
     
 0.656
A0A044V940
MPN domain-containing protein.
    
  0.618
A0A044T7M6
Uncharacterized protein.
   
 
  0.599
A0A044V9A3
Uncharacterized protein.
   
 
  0.599
Your Current Organism:
Onchocerca volvulus
NCBI taxonomy Id: 6282
Other names: O. volvulus
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