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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A044REC0Uncharacterized protein. (545 aa)    
Predicted Functional Partners:
A0A044U6F5
Uncharacterized protein.
   
 0.934
A0A2K6WC30
Uncharacterized protein.
    
 0.881
A0A044UVA4
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.872
A0A044T8D8
Sm domain-containing protein.
    
 0.871
A0A2K6WF24
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.867
A0A2K6VRM2
WD_REPEATS_REGION domain-containing protein.
   
  0.863
A0A044UCR7
Small nuclear ribonucleoprotein Sm D2.
   
  0.857
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.855
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
   
  0.851
A0A044SGG7
Small nuclear ribonucleoprotein G.
   
 0.849
Your Current Organism:
Onchocerca volvulus
NCBI taxonomy Id: 6282
Other names: O. volvulus
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