A0A044RIP5 protein (Onchocerca volvulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A044RIP5

Uncharacterized protein. (1424 aa)

Predicted Functional Partners:

A0A044S6I2

0.895

A0A044VH19

0.857

A0A2K6VPX1

0.855

A0A044SYT5

0.826

A0A044RGE0

0.820

A0A2K6WBM8

0.820

A0A044V479

0.801

A0A044TXS3

0.795

A0A044UWL0

0.790

A0A044UFI4

0.788

Your Current Organism:

Onchocerca volvulus

NCBI taxonomy Id: 6282
Other names: O. volvulus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A044RGE0	A0A044RIP5	Uncharacterized protein.	Uncharacterized protein.	0.820
A0A044RGE0	A0A044S6I2	Uncharacterized protein.	Uncharacterized protein.	0.841
A0A044RGE0	A0A044SYT5	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.988
A0A044RGE0	A0A044TXS3	Uncharacterized protein.	Carrier domain-containing protein.	0.839
A0A044RGE0	A0A044UWL0	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.727
A0A044RGE0	A0A044V479	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.692
A0A044RGE0	A0A044VH19	Uncharacterized protein.	ACB domain-containing protein.	0.995
A0A044RGE0	A0A2K6VPX1	Uncharacterized protein.	PKS_AT domain-containing protein.	0.533
A0A044RIP5	A0A044RGE0	Uncharacterized protein.	Uncharacterized protein.	0.820
A0A044RIP5	A0A044S6I2	Uncharacterized protein.	Uncharacterized protein.	0.895
A0A044RIP5	A0A044SYT5	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.826
A0A044RIP5	A0A044TXS3	Uncharacterized protein.	Carrier domain-containing protein.	0.795
A0A044RIP5	A0A044UFI4	Uncharacterized protein.	Isochorismatase domain-containing protein.	0.788
A0A044RIP5	A0A044UWL0	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.790
A0A044RIP5	A0A044V479	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.801
A0A044RIP5	A0A044VH19	Uncharacterized protein.	ACB domain-containing protein.	0.857
A0A044RIP5	A0A2K6VPX1	Uncharacterized protein.	PKS_AT domain-containing protein.	0.855
A0A044RIP5	A0A2K6WBM8	Uncharacterized protein.	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.	0.820
A0A044S6I2	A0A044RGE0	Uncharacterized protein.	Uncharacterized protein.	0.841
A0A044S6I2	A0A044RIP5	Uncharacterized protein.	Uncharacterized protein.	0.895