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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A044SC47tRNA_int_endo domain-containing protein. (332 aa)    
Predicted Functional Partners:
A0A044UGW7
Uncharacterized protein.
    
 0.987
A0A044SD73
Uncharacterized protein.
   
 0.936
A0A2K6WFY3
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.843
A0A044V090
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
    
 0.780
A0A044QUB6
Uncharacterized protein.
  
  
 0.722
A0A044QYN8
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.678
A0A2K6WJR2
Uncharacterized protein.
   
    0.658
A0A044SUD3
RRM domain-containing protein.
    
  0.580
A0A2K6W2A3
RRM domain-containing protein.
    
  0.580
A0A044UX34
RRM domain-containing protein.
    
  0.575
Your Current Organism:
Onchocerca volvulus
NCBI taxonomy Id: 6282
Other names: O. volvulus
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