STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A044SMN3Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
A0A044U4G1
Uncharacterized protein.
   
 
 0.975
A0A044VH51
DUF667 domain-containing protein.
    
 
 0.953
A0A044ST93
Uncharacterized protein.
    
 
 0.800
A0A044SU88
WD_REPEATS_REGION domain-containing protein.
   
 
 0.776
A0A044RGY6
Calponin-homology (CH) domain-containing protein.
    
 
 0.763
A0A044U7A4
Calponin-homology (CH) domain-containing protein.
    
 
 0.763
A0A044V456
Calponin homolog OV9M.
    
 
 0.763
A0A2K6VHU9
Transgelin; Belongs to the calponin family.
    
 
 0.763
CLPH_ONCVO
Calponin homolog OV9M; Could be involved in muscle contraction; Belongs to the calponin family.
    
 
 0.763
A0A044SNE2
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.757
Your Current Organism:
Onchocerca volvulus
NCBI taxonomy Id: 6282
Other names: O. volvulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.