A0A044SWF3 protein (Onchocerca volvulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A044SWF3

Uncharacterized protein. (322 aa)

Predicted Functional Partners:

A0A044SAR9

0.999

A0A2K6VGM0

0.999

A0A044RBU7

0.985

A0A044R176

0.984

A0A044RI77

0.984

A0A044SZM3

0.983

A0A044QNP6

0.982

A0A044V9M0

0.980

A0A2K6VFR7

0.979

A0A044RAF9

0.977

Your Current Organism:

Onchocerca volvulus

NCBI taxonomy Id: 6282
Other names: O. volvulus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A044QNP6	A0A044R176	U-box domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.955
A0A044QNP6	A0A044RAF9	U-box domain-containing protein.	UBX domain-containing protein.	0.849
A0A044QNP6	A0A044RBU7	U-box domain-containing protein.	Uncharacterized protein.	0.824
A0A044QNP6	A0A044RI77	U-box domain-containing protein.	Uncharacterized protein.	0.955
A0A044QNP6	A0A044SAR9	U-box domain-containing protein.	UBX domain-containing protein.	0.728
A0A044QNP6	A0A044SWF3	U-box domain-containing protein.	Uncharacterized protein.	0.982
A0A044QNP6	A0A044SZM3	U-box domain-containing protein.	Uncharacterized protein.	0.882
A0A044QNP6	A0A044V9M0	U-box domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.424
A0A044QNP6	A0A2K6VFR7	U-box domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.407
A0A044QNP6	A0A2K6VGM0	U-box domain-containing protein.	Uncharacterized protein.	0.977
A0A044R176	A0A044QNP6	Uncharacterized protein; Belongs to the AAA ATPase family.	U-box domain-containing protein.	0.955
A0A044R176	A0A044RAF9	Uncharacterized protein; Belongs to the AAA ATPase family.	UBX domain-containing protein.	0.966
A0A044R176	A0A044RBU7	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.955
A0A044R176	A0A044RI77	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.831
A0A044R176	A0A044SAR9	Uncharacterized protein; Belongs to the AAA ATPase family.	UBX domain-containing protein.	0.999
A0A044R176	A0A044SWF3	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.984
A0A044R176	A0A044SZM3	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.974
A0A044R176	A0A044V9M0	Uncharacterized protein; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.981
A0A044R176	A0A2K6VFR7	Uncharacterized protein; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.984
A0A044R176	A0A2K6VGM0	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.991