Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A044SWT0Kin17_mid domain-containing protein. (438 aa)    
Predicted Functional Partners:
A0A044VCC3
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
   0.760
A0A044RES8
CPSF_A domain-containing protein.
    
   0.752
A0A044VAL3
TOG domain-containing protein.
    
   0.752
A0A044RBV0
Matrin-type domain-containing protein.
    
 
 0.715
A0A044S2Y7
WD_REPEATS_REGION domain-containing protein.
   
   0.677
A0A044SAP6
Uncharacterized protein.
    
 0.659
A0A044V306
Uncharacterized protein.
    
 0.659
A0A2K6VT73
DUF1619 domain-containing protein.
    
 0.659
A0A044S7A6
Uncharacterized protein.
   
   0.563
A0A044UJK8
Uncharacterized protein.
   
   0.562
Your Current Organism:
Onchocerca volvulus
NCBI taxonomy Id: 6282
Other names: O. volvulus
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