A0A044SWX0 protein (Onchocerca volvulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A044SWX0

PlsC domain-containing protein. (396 aa)

Predicted Functional Partners:

A0A044UF56

0.925

A0A044U6L5

0.918

A0A044U6L0

0.900

A0A044UM37

0.898

A0A2K6W8M4

0.890

A0A044SF46

0.763

A0A044TP95

0.695

A0A044UM47

0.670

A0A044TN84

0.650

A0A044UWL0

0.634

Your Current Organism:

Onchocerca volvulus

NCBI taxonomy Id: 6282
Other names: O. volvulus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A044SF46	A0A044SWX0	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	PlsC domain-containing protein.	0.763
A0A044SF46	A0A044TN84	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.	0.924
A0A044SF46	A0A044TP95	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	PlsC domain-containing protein.	0.968
A0A044SF46	A0A044U6L0	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	PlsC domain-containing protein.	0.939
A0A044SF46	A0A044U6L5	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	PlsC domain-containing protein.	0.957
A0A044SF46	A0A044UF56	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	Uncharacterized protein.	0.897
A0A044SF46	A0A044UM37	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	PlsC domain-containing protein.	0.704
A0A044SF46	A0A044UM47	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	Acyltransf_C domain-containing protein.	0.704
A0A044SF46	A0A2K6W8M4	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	PlsC domain-containing protein.	0.956
A0A044SWX0	A0A044SF46	PlsC domain-containing protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.763
A0A044SWX0	A0A044TN84	PlsC domain-containing protein.	PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.	0.650
A0A044SWX0	A0A044TP95	PlsC domain-containing protein.	PlsC domain-containing protein.	0.695
A0A044SWX0	A0A044U6L0	PlsC domain-containing protein.	PlsC domain-containing protein.	0.900
A0A044SWX0	A0A044U6L5	PlsC domain-containing protein.	PlsC domain-containing protein.	0.918
A0A044SWX0	A0A044UF56	PlsC domain-containing protein.	Uncharacterized protein.	0.925
A0A044SWX0	A0A044UM37	PlsC domain-containing protein.	PlsC domain-containing protein.	0.898
A0A044SWX0	A0A044UM47	PlsC domain-containing protein.	Acyltransf_C domain-containing protein.	0.670
A0A044SWX0	A0A044UWL0	PlsC domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.634
A0A044SWX0	A0A2K6W8M4	PlsC domain-containing protein.	PlsC domain-containing protein.	0.890
A0A044TN84	A0A044SF46	PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.924