A0A044TP10 protein (Onchocerca volvulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Onchocerca volvulus

NCBI taxonomy Id: 6282
Other names: O. volvulus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A044SCR5	A0A044SVC0	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.890
A0A044SCR5	A0A044T3Y4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.689
A0A044SCR5	A0A044TAU4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.998
A0A044SCR5	A0A044TP10	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein.	0.915
A0A044SCR5	A0A044UPX7	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.758
A0A044SCR5	A0A044URB4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.555
A0A044SCR5	A0A044V4F8	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.998
A0A044SCR5	A0A044VG44	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Maelstrom domain-containing protein.	0.991
A0A044SLS0	A0A044TP10	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.891
A0A044SN57	A0A044SVC0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.876
A0A044SN57	A0A044T3Y4	Protein kinase domain-containing protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.965
A0A044SN57	A0A044TP10	Protein kinase domain-containing protein.	Uncharacterized protein.	0.912
A0A044SVC0	A0A044SCR5	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.890
A0A044SVC0	A0A044SN57	Uncharacterized protein.	Protein kinase domain-containing protein.	0.876
A0A044SVC0	A0A044T3Y4	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.981
A0A044SVC0	A0A044TAU4	Uncharacterized protein.	Uncharacterized protein.	0.730
A0A044SVC0	A0A044TP10	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A044SVC0	A0A044UPX7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.755
A0A044SVC0	A0A044URB4	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.410
A0A044SVC0	A0A044V4F8	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.900