A0A044VGN0 protein (Onchocerca volvulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A044VGN0

Uncharacterized protein. (749 aa)

Predicted Functional Partners:

A0A2K6WCY6

0.944

A0A044RGL8

0.938

A0A044V9C5

0.810

A0A044T4U4

0.798

A0A044RNC6

0.746

A0A044U7C5

0.746

A0A2K6VJG0

0.746

A0A044RG61

0.745

A0A044V7H8

0.730

A0A044VB80

0.730

Your Current Organism:

Onchocerca volvulus

NCBI taxonomy Id: 6282
Other names: O. volvulus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A044RG61	A0A044RNC6	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Protein kinase domain-containing protein.	0.923
A0A044RG61	A0A044U7C5	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Serine/threonine-protein kinase PLK.	0.923
A0A044RG61	A0A044VGN0	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.745
A0A044RG61	A0A2K6VJG0	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	Uncharacterized protein.	0.923
A0A044RGL8	A0A044RNC6	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Protein kinase domain-containing protein.	0.570
A0A044RGL8	A0A044U7C5	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Serine/threonine-protein kinase PLK.	0.570
A0A044RGL8	A0A044VGN0	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Uncharacterized protein.	0.938
A0A044RGL8	A0A2K6VJG0	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Uncharacterized protein.	0.570
A0A044RNC6	A0A044RG61	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.923
A0A044RNC6	A0A044RGL8	Protein kinase domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.570
A0A044RNC6	A0A044T4U4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.638
A0A044RNC6	A0A044VGN0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.746
A0A044T4U4	A0A044RNC6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.638
A0A044T4U4	A0A044U7C5	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.638
A0A044T4U4	A0A044VGN0	Uncharacterized protein.	Uncharacterized protein.	0.798
A0A044T4U4	A0A2K6VJG0	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A044U7C5	A0A044RG61	Serine/threonine-protein kinase PLK.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.923
A0A044U7C5	A0A044RGL8	Serine/threonine-protein kinase PLK.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.570
A0A044U7C5	A0A044T4U4	Serine/threonine-protein kinase PLK.	Uncharacterized protein.	0.638
A0A044U7C5	A0A044VGN0	Serine/threonine-protein kinase PLK.	Uncharacterized protein.	0.746