STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPLM_LOCUS4146Uncharacterized protein. (320 aa)    
Predicted Functional Partners:
HPLM_LOCUS4421
Uncharacterized protein.
   
    0.740
HPLM_LOCUS8406
Uncharacterized protein.
   
    0.740
HPLM_LOCUS8092
Uncharacterized protein.
   
    0.740
HPLM_LOCUS3072
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
    0.714
HPLM_LOCUS1817
Uncharacterized protein.
   
    0.629
A0A3P7XVX5
Ion_trans_2 domain-containing protein.
   
    0.629
A0A0N4WJU4
Uncharacterized protein.
   
    0.591
A0A0N4WXX2
Uncharacterized protein.
   
    0.558
Your Current Organism:
Haemonchus placei
NCBI taxonomy Id: 6290
Other names: H. placei
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