STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPLM_LOCUS4152Reverse transcriptase domain-containing protein. (290 aa)    
Predicted Functional Partners:
A0A0N4X859
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.722
HPLM_LOCUS9372
Uncharacterized protein.
   
   0.582
HPLM_LOCUS3349
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.565
A0A0N4WNQ0
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.562
A0A0N4X823
Uncharacterized protein.
    
 0.554
HPLM_LOCUS7214
Ubiquitin-like domain-containing protein.
    
  0.543
HPLM_LOCUS9929
Ubiquitin-like domain-containing protein.
    
  0.537
A0A158QQV6
Ribosomal_L2_C domain-containing protein.
   
 
 0.521
HPLM_LOCUS1184
Uncharacterized protein.
  
     0.518
HPLM_LOCUS8261
MPN domain-containing protein.
    
  0.516
Your Current Organism:
Haemonchus placei
NCBI taxonomy Id: 6290
Other names: H. placei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.