STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPLM_LOCUS5752Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (238 aa)    
Predicted Functional Partners:
HPLM_LOCUS165
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.969
HPLM_LOCUS6576
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
    
 
 0.964
A0A0N4WMJ6
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.960
HPLM_LOCUS2685
Uncharacterized protein.
    
 
 0.923
HPLM_LOCUS7717
RPOLD domain-containing protein.
    
 
 0.917
A0A0N4WSB5
Uncharacterized protein.
    
 
 0.904
A0A0N4WTZ4
Uncharacterized protein.
    
 
 0.904
HPLM_LOCUS1099
Uncharacterized protein.
    
 
 0.904
A0A3P7UZS2
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.843
HPLM_LOCUS5588
Raptor_N domain-containing protein.
    
 0.795
Your Current Organism:
Haemonchus placei
NCBI taxonomy Id: 6290
Other names: H. placei
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