STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPLM_LOCUS8253Uncharacterized protein. (319 aa)    
Predicted Functional Partners:
A0A0N4WLG9
NTF2 domain-containing protein.
   
 
 0.586
A0A158QRB0
TPT domain-containing protein.
   
  
 0.544
HPLM_LOCUS7728
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
  
 0.530
HPLM_LOCUS7355
J domain-containing protein.
  
  
 0.529
HPLM_LOCUS2057
Uncharacterized protein.
  
 
 0.475
A0A0N4X120
Uncharacterized protein; Belongs to the peptidase M24B family.
  
 
 0.475
HPLM_LOCUS2270
Creatinase_N domain-containing protein.
  
 
 0.475
HPLM_LOCUS2575
Peptidase_M24 domain-containing protein; Belongs to the peptidase M24B family.
    
 0.469
HPLM_LOCUS2715
Uncharacterized protein.
    
 0.469
HPLM_LOCUS9390
Uncharacterized protein.
    
 0.469
Your Current Organism:
Haemonchus placei
NCBI taxonomy Id: 6290
Other names: H. placei
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