STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N4WPL8RRM domain-containing protein. (200 aa)    
Predicted Functional Partners:
A0A0N4X4H1
Suf domain-containing protein.
   
 0.929
HPLM_LOCUS4135
Fip1 domain-containing protein.
   
 0.925
HPLM_LOCUS6541
Uncharacterized protein.
   
 0.913
A0A158QQM2
Uncharacterized protein.
   
 0.910
A0A0N4WLA9
CPSF_A domain-containing protein.
   
 0.902
A0A0N4WVA2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.901
HPLM_LOCUS6339
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.895
HPLM_LOCUS5505
WD_REPEATS_REGION domain-containing protein.
    
 0.893
A0A0N4WP86
RRM domain-containing protein.
  
 0.892
A0A0N4X4H4
WD_REPEATS_REGION domain-containing protein.
    
 0.887
Your Current Organism:
Haemonchus placei
NCBI taxonomy Id: 6290
Other names: H. placei
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.