STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0047Conserved hypothetical secreted protein Homology to pa4487 of P. aeruginosa of 52% (trembl|Q9HVT4(SRS)) no domains predicted signal peptide no TMHs; Conserved hypothetical protein. (251 aa)    
Predicted Functional Partners:
azo0059
Conserved hypothetical secreted protein. Homology to rsc3030 of R. solanacearum of 48% (sprot|YU30_RALSO) Pfam: Alpha-2-macroglobulin family Nterminal region (PF01835, PF07703) signal peptide no TMHs; Conserved hypothetical protein.
 
  
 0.934
azo0060
Conserved hypothetical secreted protein. Homology to RS04726 of R. solanacearum of 55% (trembl|Q8XV01(SRS)) Has PF06672;(IPR009558)Protein of unknown function (DUF1175):This family consists of several hypothetical bacterial proteins of around 210 residues in length. The function of this family is unknown. No TMHs signal peptide present; Conserved hypothetical protein.
 
  
 0.888
azo0048
Conserved hypothetical secreted protein. Homology to rsc3028 of R. solanacearum of 57% (trembl|Q8XV04(SRS)) no domains predicted signal peptide no TMHs; Conserved hypothetical protein.
 
   
0.821
azo0049
Conserved hypothetical secreted protein. Homology to PA4488 of P. aeruginosa of 47% (trembl|Q9HVT3(SRS)) No domains predicted. No TMHs. Singal Peptide Present; Conserved hypothetical protein.
  
  
 0.805
azo0061
Conserved hypothetical secreted protein. Homology to RS04725 of Ralstonia solanacearum of 43% (trembl|Q8XV00(SRS)) No domains predicted. Signal Peptide Present. NO TMH reported present; Conserved hypothetical protein.
  
  
 0.733
dehH
Hypothetical haloacetate dehalogenase H-1 (EC 3.8.1.3). Haloacetate + H(2)O = glycolate + halide TREMBL:Q8Y2S9: 58% identity, 67% similarity Gene name:dehH from Ralstonia solanacearum genome project. InterPro: Alpha/beta hydrolase fold InterPro:IPR000073; A/b_hydrolase. IPR000379: Ser_estrs. Pfam:PF00561; Abhydrolase_1 nadp_idh_euk: isocitrate dehydrogenase No TMH present absence of signal peptide; Family membership.
       0.584
azo3121
Putative endonuclease,42% Identity to TrEMBL;Q8XWM2, 33% Identity to TrEMBL;Q8VMF9. Has Signal peptide. Has PLDc, Phospholipase D. Active site motifs; The PLD superfamily includes enzymes involved in signal transduction, lipid biosynthesis, endonucleases and open reading frames in pathogenic viruses and bacteria. PLD hydrolyzes the terminal phosphodiester bond of phospholipids to phosphatidic acid and a hydrophilic constituent. Phosphatidic acid is a compound that is heavily involved in signal transduction. The common features of the family members are that they can bind to a phosphodi [...]
   
    0.524
phaZ
Poly (3-hydroxybutyrate) depolymerase; This protein degrades water-insoluble and water-soluble PHB to monomeric D(-)-3-hydroxybutyrate,TREMBL:Q9LBN6 (35% identity); TREMBL:Q46334 (34% identity). SignalP predicting signal peptide; High confidence in function and specificity.
       0.405
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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