STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0103Conserved hypothetical secreted protein. Homology to SMa0025 of S. meliloti of 46% pir|D95263(SRS). Pfam: Transglutaminase_like Superfamily signal peptide no TMHs; Conserved hypothetical protein. (370 aa)    
Predicted Functional Partners:
helX
Putative thiol:disulfide oxidoreductase. Homology to helX of R. casulata of 35% Periplasmic protein thiol:disulphide oxidoreductase is involved in the biogenesis of c-type cytochromes as well as in disulphide bond formation in some periplasmic proteins. Tigrfam: dsbE: periplasmic protein thiol:disulfide signal peptide no TMHs; High confidence in function and specificity.
       0.773
htpX
Putative protease HtpX Homolog to htpX of E. coli of 30% (AAA62779) InterPro: Peptidase family M48 (IPR001915) Pfam: Peptidase family M48 signal peptide TMHs3; Family membership; Belongs to the peptidase M48B family.
       0.741
azo3768
Putative catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
   0.626
azo0750
Conserved hypothetical membrane protein. TREMBL:Q89QQ8: 34% identity This is a subfamily of bacterial binding-protein-dependent transport systems family, and includes transport system permease proteins involved in the transport across the membrane of several compounds. This entry contains the inner components of this multicomponent transport system InterPro: IPR000522; FecD. Pfam: PF01032; FecCD ncs1: NCS1 nucleoside transporter fam Nonsecretory protein with signal peptide probability 0.203 (Signal P predicted). TMHMM predicted 9 transmembrane helices; Function unclear.
 
     0.587
fmt
Fmt protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
       0.569
azo0104
Conserved hypothetical secreted protein. Homology to ebA582 of Azoacrus sp EbN1 (trembl:Q5P8D6). No domains predicted. SignalP reporting signal peptid. no TMHs; Conserved hypothetical protein.
       0.535
azo1603
Conserved hypothetical protein,52% Identity to TrEMBL;Q9HUN7. Has PF04169;Domain of unknown function (DUF404);(IPR007297)This is a protein of unknown function. It sometimes occurs in combination with two domains of unknown function DUF403 (IPR007296) and DUF407 (IPR007302). Has PF04174;Domain of unknown function (DUF407);This is a protein of unknown function. It sometimes occurs in combination with two domains of unknown function DUF403 (IPR007296) and DUF404 (IPR007297). Has PF04168;Bacterial domain of unknown function (DUF403);This is a protein of unknown function. It sometimes occur [...]
  
  
 0.528
flgN
Putative chaperon of flagella synthesis. FlgN is an export chaperon of FlgM and FlgK involved in flagellar synthesis. no signal peptide no TMHs; Family membership.
  
     0.494
def1
Probable peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.468
azo0108
Conserved hypothetical secreted protein. Homology to XCC0740 of Xanthomonas campestris of 33% (trembl|Q8PCI6(SRS) Pfam: Glycosyl hydrolases family 2,TIM barrel domain This family contains beta-galactosidase,beta-mannosidase and beta-glucuronidase activities. No TMHs Signal peptide: present; Conserved hypothetical protein.
  
     0.466
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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