STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0126Conserved hypothetical protein with 74% similarity(57% identity)to Conserved hypothetical protein [Sinorhizobium meliloti]. No Signal peptide reported to be present. No TMH reported to be present. Has PF07045,Protein of unknown function (DUF1330)This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown. TIGRFAM:acolac_sm: acetolactate synthase,small s; Family membership. (102 aa)    
Predicted Functional Partners:
azo0124
Hypothetical secreted protein. no homology to the data bank. no domains predicted signal peptide no TMHs.
       0.773
azo0125
Conserved hypothetical secreted protein.
       0.773
azo0123
Putative threonine efflux protein.
       0.572
azo0127
Hypothetical protein, 40% identity to TrEMBL;Q73S36 Weak Homology with most protein hits in the database. No Domains/Features/Motifs predicted present.
       0.527
azo0122
Probable Fe-S cluster redox enzyme; Region start changed from 140962 to 141091 (129 bases); Belongs to the radical SAM superfamily. RlmN family.
       0.434
azo1723
Conserved hypothetical protein. Homology to blr5713 of B.japonicum of 45% (tremble:Q89IC6). No domains predicted. No TMHs. SignalP 3.0 predicts no signal peptide.
   
    0.434
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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