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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0140Conserved hypothetical protein. Homology to an orf of Ralstonia eutropha of 61% (ZP_00167955). No domains predicted. No TMHs. No signal peptide. (389 aa)    
Predicted Functional Partners:
azo1600
Conserved hypothetical protein. Homology to Rgel02003216 of Rubrivivax gelatinosus of 54% (gi|47572589|ref|ZP_00242632.1|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs.
  
     0.591
gidA
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.505
gidB
Probable methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
       0.505
azo3620
Putative adenylate/ guanylate cyclase,; Function unclear.
  
     0.450
azo2767
Conserved hypothetical protein. Homology to Daro03000304 of Dechloromonas aromatica of 54% (gi|46140561|ref|ZP_00152132.2|(NBCI ENTREZ)). Has PF04519; Protein of unknown function, DUF583:This family contains several uncharacterised hypothetical proteins. No Signal peptide or TMH reported as present.
  
     0.406
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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