STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0144Probable nucleotidyltransferase; Hypothetical protein MJ0435. trembl:Q8DGT1:51% identity, 64% similarity InterPro: IPR002934; NTP_transf. Pfam: PF01909; NTP_transf_2 No signal peptide (Signal P predicted) No transmembrane helices (TMHMM predicted). hstdl_phs_rel: histidinol phosphatase-r; Specificity unclear. (97 aa)    
Predicted Functional Partners:
azo0145
Conserved hypothetical secreted protein. Homology to TLL2231 of Thermosynechococcus elongatus of 34% (tremble:Q8DGT2). Signal peptide present. No TMH reported present. Has (IPR008201)PF01934 Protein of unknown function DUF86;The function of members of this family is unknown; Conserved hypothetical protein.
 
  
 0.963
parB
Probable chromosome partitioning protein,; High confidence in function and specificity; Belongs to the ParB family.
       0.773
parA1
ParA family protein; Putative chromosome partitioning protein; High confidence in function and specificity.
       0.762
maeB1
Probable malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) (NADP-ME). Homology to dme of S. meliloti of 60% (sprot|MAO1_RHIME). Required for symbiotic nitrogen fixation. Plays a key role in the conversion of malate to acetyl-CoA for efficient tricarboxylic acid cycle function in nitrogen-fixating bacteria. Tigrfam: pta: phosphotransacetylase Pfam: Malic enzyme; Phosphate acetyl/butaryltransferase no signal peptide no TMHs; High confidence in function and specificity.
    
  0.565
maeB2
Probable malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+). Homology to dme of S. meliloti of 61% (sprot|MAO1_RHIME). Required for symbiotic nitrogen fixation. Plays a key role in the conversion of malate to acetyl-CoA for efficient tricarboxylic acid cycle function in nitrogen-fixating bacteria. InterPro: Phosphate acetyl/butaryl transferase (IPR002505); Malic enzyme (IPR001891) Pfam: Malic enzyme; Phosphate acetyl/butaryl transferase Tigrfam: pta: phosphotransacetylase no signal peptide no TMHs; High confidence in function and specificity.
    
  0.565
gidA
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.485
gidB
Probable methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
       0.485
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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