Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mreCRod shape-determining protein; Involved in formation and maintenance of cell shape. (305 aa)    
Predicted Functional Partners:
mreB
Rod shape-determining protein mreB. INVOLVED IN FORMATION OF THE ROD SHAPE OF THE CELL. MAY ACT AS A NEGATIVE REGULATOR OF FTSI. InterPro: Cell shape determining protein MreB/Mrl mreB: cell shape determining protein; High confidence in function and specificity.
 
 
 0.996
mreD
Rod shape-determining protein mreD. Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins; High confidence in function and specificity.
 
 
 0.990
pbpA
Penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
 
 
 0.987
rodA
Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.966
minC
Putative cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.908
FtsI
Probable peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.
 
 
 0.826
rlpA
Lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
  
 0.825
minD
Septum site-determining protein minD (Cell division inhibitor minD); High confidence in function and specificity.
  
    0.825
radC1
DNA repair protein radC homolog, 64% Idnentity to SwisProt;Q82UL9,(58%) to Q8XWN0. TrEMBL;Q7NTH5(60% Identity) Signal Peptide Present Has PF04002, RadC, DNA repair protein;IPR001405: RadC plays a role in repair of DNA damage after UV and X-ray irradiation in prokaryotes. The E. coli radC gene encodes a RecG-like DNA recombination/repair function. RadC may function specifically in recombinational repair that is associated with the replication fork; Belongs to the UPF0758 family.
  
  
 0.752
radC2
DNA repair protein radC homolog; High confidence in function and specificity; Belongs to the UPF0758 family.
  
  
 0.752
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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