STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0295Conserved hypothetical protein. Homology to CV2374 of C.violaceum of 31% (tremble:Q7NVG9). No domains predicted. No signal peptide or TMH present. (144 aa)    
Predicted Functional Partners:
azo3373
Conserved hypothetical protein. Homology to cv1788 of C. violaceum of 33% (trembl|Q7NX41). no domains predicted. no signal peptide. no TMHS.
  
     0.774
azo3760
Hypothetical secreted protein. No good homology of the entire protein to the data bank. Has PF06097,Bacterial protein of unknown function (DUF945);IPR010352; This family consists of several hypothetical bacterial proteins of unknown function. No TMHs Siganl peptide present.
  
     0.740
azo3116
Conserved hypothetical protein. Homology to NMA0336 of N.meningitidis of 59% (trembl:Q9JRG4) Has PF01381 Helix-turn-helix:IPR001387:HTH_3;This is large family of DNA binding helix-turn helix proteins that include a bacterial plasmid copy control protein, bacterial methylases,various bacteriophage transcription control proteins and a vegetative specific protein from Dictyostelium discoideum. No signal peptide or TMH reported present.
  
     0.703
azo3240
Putative response regulator,; Conserved hypothetical protein.
  
     0.689
azo1495
Conserved hypothetical protein. Homology to CV0860 of Chromobacterium violaceum of 50% (trembl: Q7NZR1). No domains predicted. No TMHs. No signal peptide.
  
     0.685
azo1011
Conserved hypothetical secreted protein. Homology to Rgel02001790 of Rubrivivax gelatinosus of 45% (gi|47573892|ref|ZP_00243929.1|(NBCI ENTREZ)). No domains predicted. No TMHs. Signal peptide present; Conserved hypothetical protein.
  
     0.672
azo0474
Exported protein with sporulation related repeat. Pfam: Sporulation related repeat. InterPro: Proline-rich region; Function unclear.
  
     0.666
azo1494
Similarity to hypothetical protein in C. violaceum.
  
     0.647
azo2591
Conserved hypothetical secreted protein. Homology to Daro03002418 of Dechloromonas aromatica of 58% (gi|53730135|ref|ZP_00150721.2|(NBCI ENTREZ)). No domains predicted. No TMHs. signal peptide present.
  
     0.645
azo2204
Conserved hypothetical protein. Homology to CV2970 of C.violaceum of 42% (trembl:Q7NTT3). No domains predicted. No TMHs. No signal peptide; Function unclear.
  
     0.635
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.