STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ubiBProbable ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. (509 aa)    
Predicted Functional Partners:
ubiG
3-demethylubiquinone-9 3-O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 
 
 0.843
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.834
azo3595
Hypothetical protein predicted by Glimmer/Critica.
 
 
 
 0.808
azo1577
Conserved hypothetical protein; Entry name TREMBL:Q8XZH0 Prim. accession # Q8XZH0 InterPro :- IPR005340; UPF0083. Pfam PF03654; ARPF; 1. Identities = 78/142 (54%), Number of predicted TMHs: 0 Prediction: Non-secretory protein Signal peptide probability: 0.000.
  
 
 
 0.781
azo0723
Putative monoxygenase. Pfam: Monoxygenase InterPro: Aromatic-ring hydroxylase (flavoprotein monoxygenase); High confidence in function and specificity.
 
 
 0.708
abmA
2-amninobenzoyl-CoA monooxygenase/reductase (EC 1.14.13.40) Homology to abmA of A. evansii of 86% (trembl|Q93FB8(SRS). natural fusion protein of a monooxygenase and a reductase; contains flavin. Pfam: Monooxygnease; NADH:flavin oxidoreductase/NADH oxidorecutase. no signal peptide. no TMHs; High confidence in function and specificity.
   
 0.699
ubiH
Probable 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein; ubiH; aromatic-ring hydroxylase (flavoprotein monooxygenase) Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone. Ubiquinone biosynthesis pathway, by similarity; High confidence in function and specificity.
  
 
 0.697
truB
tRNA pseudouridine 55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
     
  0.645
azo0715
Conserved hypothetical protein. Homology to DP0001 of Desulfotalea psychrophila of 43% (gnl|keqq|dps:DP0001(KEGG)). No domains predicted. No signal peptide. No TMHs.
    
 
 0.641
fusA1
Putative elongation factor EF-G. Homology to FusA of E. coli of 29% (sprot|EFG_ECOLI(SRS)) This protein promotes the GTP-dependent translocation of the nascent protein chain from the A-site to the P-site of the ribosome. Interpro: Elongation factor G, C-terminus (IPR000640); Elongation factor Tu domain 2 (IPR004161); GTP-binding elongation factor (IPR000795); ATP/GTP-binding site motifA (P-loop) (IPR001687) Tigrfam: EF-G: translation elongation factor G Pfam: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor G C-terminus no signal peptide no TMHs [...]
     
 0.600
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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