STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0401Heptaprenyl diphosphate synthase component I, 23% identity (45% similarity) to TrEMBL;Q896H9. Has PF07456,Heptaprenyl diphosphate synthase component I;IPR010898,Hpre_diP_synt_I: This family contains component I of bacterial heptaprenyl diphosphate synthase (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7. (180 aa)    
Predicted Functional Partners:
azo0400
Conserved hypothetical membrane protein. Homology to TP1032 of Treponema pallidum of 32% (sprot|YA32_TREPA(SRS)). Has PF07009(IPR010739):Protein of unknown function (DUF1312);This family consists of several bacterial proteins of around 120 residues in length. The function of this family is unknown. No singal peptide. 1 TMH; Conserved hypothetical protein.
 
    0.986
azo0399
Conserved hypothetical protein; Displays ATPase and GTPase activities.
       0.825
azo1044
Conserved hypothetical membrane protein. Homology to ebA4769 of Azoarcus sp. EbN1 of 53% (gnl|keqq|eba:ebA4769(KEGG)). Pfam: Cobalt transport protein. signal peptide. 3 TMHs; Family membership.
 
   
 0.777
azo3754
Putative thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.726
rnfC2
Putative electronen transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
     0.617
rnfE2
Probable electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
     0.606
rnfD2
Putative electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
     0.600
azo2805
Conserved hypothetical protein. Homlogy to ebA1048 Azoarcus sp. EbN1 of 65% (gnl|keqq|eba:ebA1048(KEGG)). no domains predicted. no signal peptide. no TMHs.
  
     0.573
rnfA2
Probable electron transport complex promplex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
     0.567
azo0396
Conserved hypothetical protein. Homology to cc1308 of C. crescentus of 35% (trembl|Q9A8P5). Pfam:DUF1289 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N-terminus. The function of this family is unknown. no signal peptide no TMHs.
       0.566
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.