STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0461Hypthetical secreted protein. No homology to the data bank. No domains predicted. No TMHs. Has signal peptide. (161 aa)    
Predicted Functional Partners:
dnr
Putative Dnr-like transcriptional activator. Similar to SWISSPROT: sprot|FIXK_RHIME (28% Rhizobium meliloti, FixK) InterPro: IPR000595 cNMP_binding. IPR001808 HTH_Crp. Pfam: PF00027 cNMP_binding. HTH reporting nucleic acid binding motif; Family membership.
 
     0.635
azo0169
Conserved hypothetical secreted protein. Homology to bll7463 of B. japonicum of 30% (tremble:Q89DH6). No domains predicted. No TMHs. Signal peptide present; Conserved hypothetical protein.
  
     0.464
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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