STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vsrAPutative sensory box histidine kinase,; High confidence in function and specificity. (464 aa)    
Predicted Functional Partners:
vsrD1
DNA-binding response regulator,; High confidence in function and specificity.
 
 0.892
uvrY
Probable two-component response regulator,; Family membership.
 0.891
azo1503
Putative two-component response regulator,; Family membership.
 0.890
vsrD2
Probable transcriptional regulator, LuxR family,; Specificity unclear.
 0.889
gacA
Probable transcriptional regulator, LuxR family,; Specificity unclear.
 0.888
flcA
Probable DNA-binding response regulator, LuxR family,; Specificity unclear.
 
 0.873
azo0648
Putative DNA-binding response regulator, LuxR family,; Function unclear.
 
 0.862
azo1817
Conserved hypothetical two-component hybrid sensor and regulator. Homology to ebA6890 of Azoarcus sp. EbN1 of 56% (gnl|keqq|eba:ebA6890(KEGG)). InterPro: IPR003594 ATPbind_ATPase. IPR004358 Bact_sens_pr_C. IPR005467 His_kinase. IPR003661 His_kinA_N. IPR009082 His_kin_homodim. IPR001610 PAC. IPR000700 PAS-assoc_C. IPR000014 PAS_domain. IPR001789 Response_reg. Pfam: PF02518 HATPase_c. PF00512 HisKA. PF00785 PAC. PF00989 PAS. PF00072 Response_reg. SMART: SM00387 HATPase_c. SM00388 HisKA. SM00086 PAC. SM00091 PAS. SM00448 REC. TIGRFAM: TIGR00229 sensory_box; 3 TMHMM reporting 7 transmembra [...]
  
 0.791
azo2450
Putative two-component system sensor protein,; Function unclear.
  
 0.779
azo2086
Putative transcriptional activator protein,; Function unclear.
 
 0.722
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.