STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0573Conserved hypothetical membrane protein. Hamology to PA3358 of P. aeruginosa of 56% InterPro: Integral membrane protein DUF6 Tigrfam: 2A78: Carboxylate/Amino Acid/Amine Transporter Pfam: Integral membrane protein DUF6 no signal peptide probable 10 TMHs; Conserved hypothetical protein. (292 aa)    
Predicted Functional Partners:
ruvC
Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.689
ybjQ
Conserved hypothetical protein, ybjQ, 65% identity to SwissProt;P75819. SwiisProt;Q8XGV2(66% identity). TrEMBL;Q83LS2(65% identity) Has PF01906, Domain of unknown function DUF74;IPR002765; Members of this protein family have no known function. The domain is about 100 amino acids long and found in prokaryotes; High confidence in function and specificity; Belongs to the UPF0145 family.
       0.682
yebC
Conserved hypothetical protein,yebC,48% identity (63% similarity) to SwissProt;Q8FGR1,P24237,Q8XFD4. TrEMBL;Q9S4S9. Has PF01709, Domain of unknown function DUF28;IPR002876; This domain is found in bacterial and yeast proteins it compromises the entire length or central region of most of the proteins in the family, all of which are hypothetical with no known function. The average length of this domain is approximately 230 amino acids long; High confidence in function and specificity.
       0.611
azo3334
Conserved hypothetical protein. Homology to BP2542 of B.pertussis of 50% (trembl:Q7VVU4). No domains predicted. No signal peptide. No TMHs.
  
     0.493
tehB
Putative tellurite resistance protein; TREMBL:Q8EI75-35% identity, 54% similarity TREMBLnew:AAS81097 InterPro: SAM (and some other nucleotide) binding motif tehB: tellurite resistance protein TehB. Toxin production and resistance responsible for potassium tellurite resistance when present in high copy number, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. otherwise, phenotypically silent.cytoplasmic (potential). was originally (ref.1) thought to be plasmid encoded.InterPro IPR000051; SAM_bind. IPR004537; TehB. Pfam PF03848; TehB; 1. T [...]
  
     0.458
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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