STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0630Conserved hypothetical secreted protein. Homology to PJS6w01004783 of Polaromonas sp. JS666 of 45% (gi|54028512|ref|ZP_00360661.1|(NBCI ENTREZ)). No domains predicted. signal peptide. TMH in signal peptide; Conserved hypothetical protein. (147 aa)    
Predicted Functional Partners:
azo0629
Conserved hypothetical secreted protein. Homology to Daro03000403 of Dechloromonas aromatica of 37% (gi|46140621|ref|ZP_00152222.2|(NBCI ENTREZ)). InterPro: Bacterial outer membrane protein (IPR006664). Pfam: OmpA family. signal peptide. no TMHs; Conserved hypothetical protein.
 
     0.929
azo0631
HD-domain containing protein.
 
     0.816
azo0628
Putative adenylate/guanylate cyclase,; Conserved hypothetical protein.
 
     0.797
azo2584
Conserved hypothetical protein; Similar to TREMBL:Q7NTT5 (32% identity).
 
  
  0.473
nodT
Putative outer membrane efflux protein. Homology to nodT from Rhizobium leguminosarum of 20% over 432 aa. The OEP family (Outer membrane efflux protein)allow export of a variety of substrates in Gram negative bacteria. Most members of NodT family are likely to export primarily small molecules rather than proteins. InterPro: Outer membrane efflux protein. Pfam: Outer membrane efflux protein Signal peptide no TMHs; Family membership.
 
     0.471
azo2557
HlyD family secretion protein; Similar to MacA; Family membership.
 
     0.467
ilvD
Dihydroxy-acid dehydratase catalyzes the fourth step in the biosynthesis of isoleucine and valine, the dehydratation of 2,3-dihydroxy-isovaleic acid into alpha-ketoisovaleric acid. Similar to sprot|ILVD_PSEAE (74%) and sprot|ILVD_ECOL6 (72%). TIGRfam (TIGR00110): Dihydroxy-acid dehydratase Pfam (PF00920): Dihydroxy-acid and 6-phosphogluconate dehydratase; High confidence in function and specificity; Belongs to the IlvD/Edd family.
       0.415
azo1058
Conserved hypothetical secreted proteins. Homology to of Dechloromonas aromatica of 56% (gi|41723709|ref|ZP_00150619.1|(NBCI ENTREZ)). Signal Peptide Present. No TMH present. Has PF03734:(IPR005490)ErfK/YbiS/YcfS/YnhG;This family of proteins are found in a range of bacteria. The conserved region contains a conserved histidine and cysteine,suggesting that these proteins have an enzymatic activity. Several members of this family contain peptidoglycan binding domains. So these proteins may use peptidoglycan or a precursor as a substrate; Conserved hypothetical protein.
  
   
 0.415
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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