STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0799Hypothetical secreted protein. no homology with the data bank. no domains predicted. signal peptide. no TMHS. (128 aa)    
Predicted Functional Partners:
azo0800
Hypothetical secreted protein. No homology to the data bank. No domains predicted. No TMHs. Signal peptide present.
       0.773
azo0801
Hypothetical membrane protein. No homology to the data bank. No domains predicted. Signal peptide present. 1 TMH present.
       0.773
gspF1
General secretion pathway protein F; Type II secretory pathway component F,; Specificity unclear.
       0.773
gspE1
Bacterial type II secretion system protein E,; Specificity unclear.
       0.773
azo0804
Hypothetical protein. No homology to a protein of similar size. No domains predicted. No signal peptide. No TMHs.
       0.773
azo0797
Conserved hypothetical secreted protein. Homology to Daro03002886 of Dechloromonas aromatica of 31% (gi|53729825|ref|ZP_00150246.2|(NBCI ENTREZ)). No domains predicted. No TMHs. Signal peptide.
       0.746
azo0798
Hypothetical secreted protein. No homology to the data bank. No domains predicted. No TMHs. Signal peptide present.
       0.746
azo0796
Conserved hypothetical membrabe protein. Homology to Mflag03002444 of Methylobacillus flagellatus of 48% (gi|46120631|ref|ZP_00201765.1|(NBCI ENTREZ)). no domains predicted. No signal peptide. 1 TMHs.
       0.642
gspD1
General secretion pathway protein D; Type II secretory pathway component D, weak similarity to SWISSPROT:HOFQ_ECOLI (18%). A number of proteins are involved in the general secretion pathway (GSP); one of these is known as protein D (GSPD protein). Protein D is involved in the type II general secretion pathway within Gram-negative bacteria, a signal sequence-dependent process responsible for protein export. InterPro (PF00263): General (type II) secretion pathway (GSP) D protein; Specificity unclear; Belongs to the bacterial secretin family.
       0.584
azo0806
Conserved hypothetical ABC transporter ATP-binding protein. Homology to rs01335 of R. solanacearum of 67% (trembl|Q8XV69). ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. They are minimally composed of four domains, with two transmembrane domains (TMDs) responsible for allocrite binding and transport and two nucleotide-binding domains (NBDs) responsible for coupling the energy of ATP hydrolysis to conformational changes in the TMDs. Both NBDs are capable of [...]
       0.429
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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