STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo0894GAF-domain containing protein,; Conserved hypothetical protein. (493 aa)    
Predicted Functional Partners:
azo2271
Conserved hypothetical protein. Homology to Daro03003250 of Dechloromonas aromatica of 32% (gi|41723264|ref|ZP_00150207.1|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs.
  
     0.762
azo1417
Conserved hypothetical protein. Homology to GSU0904 of Geobacter sulfurreducens of 31% (gnl|keqq|gsu:GSU0904(KEGG)). No domains predicted. No TMHs. No signal peptide.
  
     0.758
azo3240
Putative response regulator,; Conserved hypothetical protein.
  
 
   0.677
azo0906
Conserved hypothetical signal transduction protein. Homology to Daro03002984 of Dechloromonas aromatica of 39% (gi|53729872|ref|ZP_00150342.2|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs; Conserved hypothetical protein.
  
     0.673
azo2779
Conserved hypothetical protein with unknown function. No domains predicted. Similarity to TREMBL: trembl|Q9I6D7 (33% Pseudomonas aeruginosa, hypothetical protein pa0356) / trembl|Q88CQ4 (30% Pseudomonas putida (strain KT2440), pp5126).
  
     0.659
azo3166
Hypothetical Protein,20% identity to TrEMBL;Q9HUK7. Very Bad homology with the hits in the DB over entire length of protein. No substantial good hits available. No signal peptide or TMH reported present.
  
     0.609
azo0166
Conserved hypothetical protein. Homology to ebA3023 of Azoarcus sp. EbN1 of 61% (trembl:Q5P4D4). No domains predicted. No TMHs. No signal peptide.
  
     0.569
secA
Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
       0.559
fliK
Flagellar hook-length control protein. Controls the length of the flagellar hook. no TMHs no signal peptide; Family membership.
  
     0.551
barA
Putative sensor-regulator protein,; Specificity unclear.
   
 0.547
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.