STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1183Conserved hypothetical membrane protein. Homology to RS01489 of Ralstonia solanacearum of 50% (trembl|Q8XXJ8(SRS)) Has PF06181:Protein of unknown function (DUF989);This family consists of several hypothetical bacterial proteins of unknown function. no signal peptide 8 TMHs; Conserved hypothetical protein. (398 aa)    
Predicted Functional Partners:
azo1184
Conserved hypothetical transthyretin. Homology to pa1518 of P. aeruniosa of 62% (sprot|YF18_PSEAE) InterPro: Transthyretin precursor (IPR000895) Pfam: Transthyretin precursor no signal peptide no TMHs; Conserved hypothetical protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.950
azo1182
Conserved hypothetical protein. Homology to RS01483 of R.solanacearum of 55% (tremble:Q8XXJ2). No domains predicted. No TMHs. No signal peptide.
 
    0.937
azo1181
Polysaccharide deacetylase family protein.This family of polysaccharide deacetylases includes NodB(nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase.It also includes chitin deacetylase from yeast,and endoxylanases which hydrolyses glucosidic bonds in xylan. 62% Polysac_deacet. Pfam:PF01522; Polysacc_deac_1. TIGR:PP4286; Function unclear.
 
    0.923
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
    0.875
xdhB
Xanthine dehydrogenase (subunit B) InterPro: Aldehyde oxidase and xanthine dehydrogenase C terminus; High confidence in function and specificity.
 
     0.762
xdhC
Xanthine dehydrogenase protein, probable (chaperone); High confidence in function and specificity.
 
     0.754
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.742
xdhA
Xanthine dehydrogenase (subunit A) oxidoreductase protein; High confidence in function and specificity.
 
     0.738
alc
Allantoicase (Allantoate amidinohydrolase); High confidence in function and specificity; Belongs to the allantoicase family.
 
    0.700
pip
Probable proline iminopeptidase; TREMBL:Q8PC98: 42% identity, 54% similarity. Proline iminopeptidase (EC 3.4.11.5) (Prolyl aminopeptidase) (PAP). SPECIFICALLY CATALYZES THE REMOVAL OF N-TERMINAL PROLINE RESIDUES FROM PEPTIDES (BY SIMILARITY). InterPro:IPR000073; A/b_hydrolase. IPR003089; AB_hydrolase. IPR002410; Peptidase_S33. IPR005944; Pept_S33. IPR000379; Ser_estrs. Pfam PF00561; Abhydrolase_1; TIGRFAMs: TIGR01249; pro_imino_pep_1 TIGR00149: conserved hypothetical protein; Specificity unclear.
       0.484
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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