STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potDBacterial extracellular solute-binding protein; Bacterial high affinity transport systems are involved in active transport of solutes across the cytoplasmic membrane. Similar to trembl|Q986V8 (37%). Pfam (PF01547): Bacterial extracellular solute-binding protein; Family membership. (386 aa)    
Predicted Functional Partners:
fbpC2
Fe3+-transporting ATPase; Ferric cations import ATP-binding protein fbpC (EC 3.6.3.30).Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in ferric cations import. Responsible for energy coupling to the transport system. 41% AAA_ATPase. IPR003439; ABC_transporter. Pfam: PF00005;ABC_tran; 1; Specificity unclear.
 
 
 0.917
fbpC1
Putative iron (III) transport system, ATP-binding protein; Ferric cations import ATP-binding protein fbpC 2 (EC 3.6.3.30). Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in ferric cations import. Responsible for energy coupling to the transport system (By similarity). InterPro: AAA ATPase superfamily apsK: adenylylsulfate kinase; Specificity unclear.
 
 
 0.907
azo1254
Conserved hypothetical signaling protein. Homology to Bcep02001865 of Burkholderia fungorum of 44% (gi|48787085|ref|ZP_00283167.1|(NBCI ENTREZ)). InterPro: IPR003660 HAMP. IPR000160 GGDEF. Pfam: PF00672 HAMP. PF00990 GGDEF domain. TIGRFAM:TIGR00254 putative diguanylate cyclase (GGDEF) domain. Signal P reporting signal peptide. TMHMM reporting 1 transmembrane helices (in signal peptide); Conserved hypothetical protein.
 
     0.816
sbcC
Exonuclease SbcC, putative; Nuclease sbcCD subunit C. SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3->5 double strand exonuclease that can open hairpins. It also has a 5 single-strand endonuclease activity (By similarity). sbcc: exonuclease SbcC; High confidence in function and specificity.
    
 0.539
azo1256
Putative serin/threonine protein kinase, only very low similarity to SWISSPROT: sprot|PKSC_STRCO (13% Streptomyces coelicolor, serine/threonine protein kinase PksC (EC 2.7.11.1)) / TREMBL: trembl|Q9S478 (13% Myxococcus xanthus, Pkn4). Pfam: PF00069 Pkinase. SMART:SM00221 STYKc (Protein kinase; unclassified specificity). SM00065 GAF (Domain present in phytochromes and cGMP-specific phosphodiesterases); Family membership.
       0.521
cysT
Sulfate transport system permease protein probably; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 
  0.472
cysA
Putative sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
    
  0.456
modC2
Putative molybdate transport system ATP-binding protein; 39% AAA_ATPase superfamily. IPR003439; ABC_transporter. IPR008995; MOP_like:molybdenum-pterin binding domain.IPR005116; TOBE. Pfam:PF00005; ABC_tran; 1.PF03459; TOBE; 1; High confidence in function and specificity.
    
  0.456
fbpA2
Part of the ABC transporter complex FbpABC involved in ferric import. Similar to the putative periplasmic-binding protein FbpA precursor in A. pleuropneumoniae. 39% SBP_bac_1. Pfam:PF01547; SBP_bac_1; 1. Signal peptide:1 TMHelix:1; Specificity unclear.
  
  
  0.449
fbpA1
Iron (III)-transport system, substrate-binding protein FbpA. Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in ferric cations import.Iron(III)periplasmic binding protein component; High confidence in function and specificity.
  
  
  0.439
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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