STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1260Conserved hypothetical protein. Homology to RPA1575 of R.palustris of 41% (tremble:Q6N9H4). Has PF04536:(IPR007621)Domain of unknown function (DUF477);This is a family of uncharacterised proteins. They are found in both eukarya and eubacteria. No TMHs. No signal peptide. (175 aa)    
Predicted Functional Partners:
azo1261
Conserved hypothetical membrane protein. Homology to Bll7266 of B. japonicum of 45% (trembel:Q89E21) InterPro:IPR007621; DUF477. Pfam:PF04536; DUF477 Signal peptide present (Signal P predicted). Presence of 2 transmembrane helices; Conserved hypothetical protein.
 
     0.921
lemA1
Conserved hypothetical LemA family protein; Putative lipoprotein [lemA],57 % identity (75% similarity) to TrEMBL;Q72TG3,TrEMBL;Q6N9H6(60% identity). No signl peptide or TMH present. Has PF04011:LemA family(IPR007156,lemA);The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular [1]. The exact molecular function of this protein is uncertain; Conserved hypothetical protein.
 
     0.899
lemA2
Conserved hypothetical lemA family protein; Putative cytoplasmic membrane protein, lemA, 41% identity(63% similarity) to TrEMBL;Q9FA50.TrEMBL;Q7CNK7(37% identity). Has PF04011,LemA family;IPR007156;The members of this family are related to the LemA protein P71452. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain; Conserved hypothetical protein.
 
     0.427
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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