STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1268Conserved hypothetical protein. Homology to PBPRB0126 of Photobacterium profundum of 54% (trembl:Q6LL06). No domains predicted. No TMHs. No signal peptide. (81 aa)    
Predicted Functional Partners:
azo1267
Probable acyl-CoA thioester hydrolase; Entry name TREMBL:Q7W380 Prim. accession # Q7W380 Identities = 111/150 (74%) InterPro IPR006683; Thioestr_supf. Pfam PF03061; 4HBT; 1. Prediction: Non-secretory protein Signal peptide probability: 0.179 Number of predicted TMHs: 0; Family membership.
       0.773
azo2509
Conserved hypothetical protein. Homology to cv0086 of C. violaceum of 76% (trembl|Q7P1X6). no signal peptide. no TMHs. No domains reported.
  
     0.573
azo3861
Hypothetical protein, 73% identity(87% similarity) to TrEMBL;Q8XU60. No domains, repeats, motifs or features not present; Function unclear.
  
     0.561
dnaJ2
Putative chaperone protein dnaJ. homology to dnaJ of E. coli of 32% (sprot|DNAJ_ECOLI) Acts as a co-chaperone. Stimulates jointly with grpE the ATPase activity of dnaK (By similarity). Pfam: DnaJ domain, DnaJ central domain (4 repeats), DnaJ Cterminal region no singal peptide no TMHs; Family membership.
       0.544
azo0661
Hypothetical protein ygjP. TREMBL:Q83JJ6: 60% identity,74% similarity (probable metal dependent hydrolase) Members of this family are found in some archaebacteria, as well as Helicobacter pylori. The proteins are 190-240 amino acids long, with the C terminus being the most conserved region, containing three conserved histidines InterPro:IPR002725; DUF45. Pfam:PF01863; DUF45 Non secretory protein with probability of signal peptide being 0.243 No transmembrane helices gmhA: phosphoheptose isomerase; High confidence in function and specificity.
 
     0.499
azo1265
Hypothetical protein, 26% identity(49% similarity) to TrEMBL;Q8XT66. TrEMBL;Q7P1L8(34% identity). No domains,repeats, motifs or features present.
       0.403
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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