STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1306Hypothetical secreted protein. Homology to CV3976 of Chromobacterium violaceum of 26% (trembl|Q7NR09(SRS)). No TMHs Signal Peptide Present. Has PF00691:OmpA family;(IPR006665 OmpA/MotB):The Pfam entry also includes MotB and related proteins which are not included in the Prosite family. (158 aa)    
Predicted Functional Partners:
tolB
Putative translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.778
azo1305
Conserved hypothetical protein. Homology to CV3977 of C.violaceum of 77% (tremble:Q7NR08). Has PF05638:(IPR008514)Protein of unknown function (DUF796);This family consists of several bacterial proteins of unknown function. No signal peptide or TMH present.
       0.775
ompA2
Putative outer membrane protein, OmpA family,36% identity(51%similarity) to TrEMBL;Q93IS0.TrEMBL;Q7AXY6(36% identity) TMHMM2 reporting presence of 1 TMH's. Has PF00691, OmpA family;IPR006665, OmpA/MotB:Most of the bacterial outer membrane proteins in this group are porin-like integral membrane proteins (such as ompA) MEDLINE:,but some are small lipid-anchored proteins.It is also found in MotB and related proteins. They are present in the outer membrane of many Gram-negative organisms; Conserved hypothetical protein.
   
 0.657
azo1304
Hypothetical protein,63% identity (81% similarity) to TrEMBL;Q8XRT7. TrEMBL;Q7NR07(73% identity,86% similarity). Has (IPR010269)PF05943:Protein of unknown function (DUF877);This family consists of a number of uncharacterised bacterial proteins. The function of this family is unknown. No Signal peptide or TMH present; Function unclear.
     
 0.634
azo1303
Hypothetical protein,50% identity (66% Similarity) to TrEMBL;Q8XRT8. TrEMBL;Q7NR06(60% identity,74% similarity). Has PF05591;Protein of unknown function (DUF770)(IPR008312)This family consists of several proteins of unknown function from various bacterial species. No Signal peptide or TMH present; Function unclear.
     
 0.632
azo1307
Probable vgr-related protein,41% identity (55% similarity) to TrEMBL;Q7NY43. TrEMBL;Q8XSF8 Has (IPR006533 Rhs_Vgr)PF04524:Protein of unknown function, DUF586;This family contains a conserved region in several bacterial proteins of unknown function. Coils2 program predicts presence of a coiled coil.
       0.598
azo1308
Conserved hypothetical protein. Homology to CV3969 of C.violaceum of 56% (tremble: Q7NR16). Has (IPR010272)PF05947:Bacterial protein of unknown function (DUF879);This family consists of several hypothetical bacterial proteins of unknown function. No signal peptide or TMH present.
       0.598
azo1309
Conserved hypothetical protein. Homology to CV3967 of C.violaceum of 45% (tremble:Q7NR18) Has (IPR010732)PF06996:Protein of unknown function (DUF1305);This family consists of several hypothetical bacterial proteins of around 300 residues in length. The function of this family is unknown although one member (Q93IT4) from Salmonella enterica is thought to be involved in virulence. No signal peptide or TMH reported present.
       0.598
ompH
Probable outer membrane protein. Homology to ompH of Y. enterocolitica of 30% (sprot|OMPH_YEREN). Pfam: outer membrane protein (OmpH-like) signal peptide no TMHs; High confidence in function and specificity; Belongs to the skp family.
  
 
 0.589
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.574
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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