STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1316Putative ATP binding protein; 47% AAA_ATPase.IPR003439; ABC_transporter.IPR008995. Pfam:PF00005; ABC_tran; 1. SMART:SM00382; AAA; 1. non-secretory protein; Function unclear. (201 aa)    
Predicted Functional Partners:
azo1315
Conserved hypothetical membrane protein. Homology to blr8071 of B. japonicum of 56% (trembl|Q89BS7). No domains predicted signal peptide probable 6 TMHs; Conserved hypothetical protein.
 
  
 0.968
azo1314
Conserved hypothetical protein. Homology to ebA3072 Azoarcus sp. EbN1 of 61% (gnl|keqq|eba:ebA3072(KEGG)). No domains predicted. No TMHs. No signal peptide.
       0.598
azo1207
Hypothetical protein predicted by Glimmer/Critica. No homology to the data bank. No domains predicted. No signal peptide. No TMHs.
  
     0.449
ccmA
Probable heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
  
     0.421
azo1317
Conserved hypothetical protein. Homology to CCO1214 of Campylobacter coli of 38% (gi|57168023|ref|ZP_00367162.1|(NBCI ENTREZ)). Has PF07021, Methionine biosynthesis protein MetW;IPR010743; This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, gram-positive bact [...]
       0.420
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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