Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| azo1384 | carA | azo1384 | azo1381 | Conserved hypothetical membrane protein. Homology to RS03781 of Ralstonia solanacearum of 39% (trembl|Q8XZ81(SRS)). no domains predicted. no signal peptide. 4 TMHs; Conserved hypothetical protein. | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain; High confidence in function and specificity; Belongs to the CarA family. | 0.636 |
| azo1384 | carB | azo1384 | azo1382 | Conserved hypothetical membrane protein. Homology to RS03781 of Ralstonia solanacearum of 39% (trembl|Q8XZ81(SRS)). no domains predicted. no signal peptide. 4 TMHs; Conserved hypothetical protein. | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity; Belongs to the CarB family. | 0.781 |
| azo1384 | greA | azo1384 | azo1383 | Conserved hypothetical membrane protein. Homology to RS03781 of Ralstonia solanacearum of 39% (trembl|Q8XZ81(SRS)). no domains predicted. no signal peptide. 4 TMHs; Conserved hypothetical protein. | Putative transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.781 |
| carA | azo1384 | azo1381 | azo1384 | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain; High confidence in function and specificity; Belongs to the CarA family. | Conserved hypothetical membrane protein. Homology to RS03781 of Ralstonia solanacearum of 39% (trembl|Q8XZ81(SRS)). no domains predicted. no signal peptide. 4 TMHs; Conserved hypothetical protein. | 0.636 |
| carA | carB | azo1381 | azo1382 | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain; High confidence in function and specificity; Belongs to the CarA family. | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity; Belongs to the CarB family. | 0.999 |
| carA | greA | azo1381 | azo1383 | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain; High confidence in function and specificity; Belongs to the CarA family. | Putative transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.669 |
| carB | azo1384 | azo1382 | azo1384 | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity; Belongs to the CarB family. | Conserved hypothetical membrane protein. Homology to RS03781 of Ralstonia solanacearum of 39% (trembl|Q8XZ81(SRS)). no domains predicted. no signal peptide. 4 TMHs; Conserved hypothetical protein. | 0.781 |
| carB | carA | azo1382 | azo1381 | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity; Belongs to the CarB family. | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain; High confidence in function and specificity; Belongs to the CarA family. | 0.999 |
| carB | greA | azo1382 | azo1383 | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity; Belongs to the CarB family. | Putative transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.845 |
| greA | azo1384 | azo1383 | azo1384 | Putative transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Conserved hypothetical membrane protein. Homology to RS03781 of Ralstonia solanacearum of 39% (trembl|Q8XZ81(SRS)). no domains predicted. no signal peptide. 4 TMHs; Conserved hypothetical protein. | 0.781 |
| greA | carA | azo1383 | azo1381 | Putative transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain; High confidence in function and specificity; Belongs to the CarA family. | 0.669 |
| greA | carB | azo1383 | azo1382 | Putative transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain InterPro: Carbamoyl-phosphate synthase; High confidence in function and specificity; Belongs to the CarB family. | 0.845 |