azo1545 protein (Azoarcus sp. BH72) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

azo1545

Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide. (290 aa)

Predicted Functional Partners:

FtsK

0.783

azo1494

0.742

smc

0.742

azo1544

0.741

azo0649

0.625

azo2854

0.605

azo2855

0.605

azo2042

0.565

azo2454

0.565

pma1

0.543

Your Current Organism:

Azoarcus sp. BH72

NCBI taxonomy Id: 62928
Other names: A. sp. BH72

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FtsK	azo1545	azo1365	azo1545	Putative cell division protein; DNA translocase ftsK 2. InterPro: FtsK/SpoIIIE family; High confidence in function and specificity.	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	0.783
azo0649	azo1545	azo0649	azo1545	Conserved hypothetical protein. Homology to ebA1795 of Azoarcus sp. EbN1 of 46% (gnl\|keqq\|eba:ebA1795(KEGG)). No domains predicted. No TMHs.	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	0.625
azo0649	azo2854	azo0649	azo2854	Conserved hypothetical protein. Homology to ebA1795 of Azoarcus sp. EbN1 of 46% (gnl\|keqq\|eba:ebA1795(KEGG)). No domains predicted. No TMHs.	Conserved hypothetical protein. Homology to PA3283 of P.aeruginosa of 54% (trembl:Q9HYW0). Has PF05114,Protein of unknown function (DUF692);IPR007801:This family consists of several uncharacterised bacterial proteins. No signal peptide or TMH present.	0.531
azo1494	azo1545	azo1494	azo1545	Similarity to hypothetical protein in C. violaceum.	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	0.742
azo1544	azo1545	azo1544	azo1545	GGDEF/EAL/PAC/PAS-domain containing protein, sym; pNGR234a) / TREMBL: trembl\|Q88A61 (38% Pseudomonas syringae (pv. tomato), sensory box/ggdef domain/eal domain protein pspto0536) InterPro: IPR000160 GGDEF. IPR000014 PAS. IPR000700 PAS-assoc_C. Pfam: PF00990 GGDEF domain. PF00989 PAS domain. PF00785 PAC motif. PF00563 EAL domain. TIGRFAM:TIGR00229 PAS domain S-box. TIGR00254 putative diguanylate cyclase (GGDEF) domain; Conserved hypothetical protein.	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	0.741
azo1545	FtsK	azo1545	azo1365	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Putative cell division protein; DNA translocase ftsK 2. InterPro: FtsK/SpoIIIE family; High confidence in function and specificity.	0.783
azo1545	azo0649	azo1545	azo0649	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Conserved hypothetical protein. Homology to ebA1795 of Azoarcus sp. EbN1 of 46% (gnl\|keqq\|eba:ebA1795(KEGG)). No domains predicted. No TMHs.	0.625
azo1545	azo1494	azo1545	azo1494	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Similarity to hypothetical protein in C. violaceum.	0.742
azo1545	azo1544	azo1545	azo1544	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	GGDEF/EAL/PAC/PAS-domain containing protein, sym; pNGR234a) / TREMBL: trembl\|Q88A61 (38% Pseudomonas syringae (pv. tomato), sensory box/ggdef domain/eal domain protein pspto0536) InterPro: IPR000160 GGDEF. IPR000014 PAS. IPR000700 PAS-assoc_C. Pfam: PF00990 GGDEF domain. PF00989 PAS domain. PF00785 PAC motif. PF00563 EAL domain. TIGRFAM:TIGR00229 PAS domain S-box. TIGR00254 putative diguanylate cyclase (GGDEF) domain; Conserved hypothetical protein.	0.741
azo1545	azo2042	azo1545	azo2042	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Conserved hypothetical membrane protein. Homology to ebA436 of Azoarcus sp. EbN1 of 49% (gnl\|keqq\|eba:ebA436(KEGG)). No domains predicted. No signal peptide. TMHMM2 reporting presence of 2 TMH's; Conserved hypothetical protein.	0.565
azo1545	azo2454	azo1545	azo2454	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Hypothetical secreted protein no homology of the entire protein to the data bank no domains predicted signal peptide no TMHs.	0.565
azo1545	azo2854	azo1545	azo2854	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Conserved hypothetical protein. Homology to PA3283 of P.aeruginosa of 54% (trembl:Q9HYW0). Has PF05114,Protein of unknown function (DUF692);IPR007801:This family consists of several uncharacterised bacterial proteins. No signal peptide or TMH present.	0.605
azo1545	azo2855	azo1545	azo2855	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Conserved hypothetical protein. Homology to PP2399 of P.putida of 36% (trembl:Q88K92). No domains predicted. No TMHs. No signal peptide.	0.605
azo1545	pma1	azo1545	azo3149	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Probable cation-transporting ATPase protein (EC 3.6.3.-).Could mediate calcium influx.Integral membrane protein.Belongs to the cation transport ATPases family (P-type ATPases). Subfamily IIA. 47% similarity to the cyanobacterium Synechocystis sp. PCC 6803, pma1. protein. SWISSPROT:ATA1_SYNY3.P37367 InterPro:IPR001757; ATPase_E1-E2.IPR006068; Cation_ATPase_C.IPR004014; Cation_ATPase_N.IPR008250; E1-E2_ATPase_reg.IPR000695; H_ATPase.IPR005834; Hydrolase. Pfam:PF00689: Cation_ATPase_C;1. PF00690: Cation_ATPase_N;1. PF00122: E1-E2_ATPase;1. PF00702: Hydrolase; 1. SignalP: present. InterPro [...]	0.543
azo1545	smc	azo1545	azo2003	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.	0.742
azo2042	azo1545	azo2042	azo1545	Conserved hypothetical membrane protein. Homology to ebA436 of Azoarcus sp. EbN1 of 49% (gnl\|keqq\|eba:ebA436(KEGG)). No domains predicted. No signal peptide. TMHMM2 reporting presence of 2 TMH's; Conserved hypothetical protein.	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	0.565
azo2042	azo2854	azo2042	azo2854	Conserved hypothetical membrane protein. Homology to ebA436 of Azoarcus sp. EbN1 of 49% (gnl\|keqq\|eba:ebA436(KEGG)). No domains predicted. No signal peptide. TMHMM2 reporting presence of 2 TMH's; Conserved hypothetical protein.	Conserved hypothetical protein. Homology to PA3283 of P.aeruginosa of 54% (trembl:Q9HYW0). Has PF05114,Protein of unknown function (DUF692);IPR007801:This family consists of several uncharacterised bacterial proteins. No signal peptide or TMH present.	0.437
azo2454	azo1545	azo2454	azo1545	Hypothetical secreted protein no homology of the entire protein to the data bank no domains predicted signal peptide no TMHs.	Hypotheical protein. No good homology of the entire protein with the data base. No domains predicted. No THs. No signal peptide.	0.565
azo2454	azo2854	azo2454	azo2854	Hypothetical secreted protein no homology of the entire protein to the data bank no domains predicted signal peptide no TMHs.	Conserved hypothetical protein. Homology to PA3283 of P.aeruginosa of 54% (trembl:Q9HYW0). Has PF05114,Protein of unknown function (DUF692);IPR007801:This family consists of several uncharacterised bacterial proteins. No signal peptide or TMH present.	0.437
azo2854	azo0649	azo2854	azo0649	Conserved hypothetical protein. Homology to PA3283 of P.aeruginosa of 54% (trembl:Q9HYW0). Has PF05114,Protein of unknown function (DUF692);IPR007801:This family consists of several uncharacterised bacterial proteins. No signal peptide or TMH present.	Conserved hypothetical protein. Homology to ebA1795 of Azoarcus sp. EbN1 of 46% (gnl\|keqq\|eba:ebA1795(KEGG)). No domains predicted. No TMHs.	0.531