STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1685Conserved hypothetical protein. Homology to NE0619 of Nitrosomonas europaea of 44% (trembl:Q82WP5). Has PF06167, IPR010384; Protein of unknown function (DUF980);Family of uncharacterised bacterial sequences. No signal peptide. No TMHs; Belongs to the MtfA family. (267 aa)    
Predicted Functional Partners:
azo1686
Conserved hypothetical membrane protein. Homology to CV2531 of C. violaceum of 42% (tremble:Q7NV15) InterPro: Integral membrane protein DUF6 Tigrfam: 2A78: Carboxylate/Amino Acid/Amine Transport Pfam: Integral membrane protein DUF6 no signal peptide probable 10 TMHS; Conserved hypothetical protein.
       0.836
azo1687
Putative exported protein; Similar to membrane carboxypeptidases; Family membership.
       0.548
azo1684
Conserved hypothetical protein. Homology to pc0921 of Parachlamydia_UWE25 of 34% (pcu:pc0921(KEGG)). No signal peptide reported to be present. No TMH reported to be present. No domains predicted.
 
     0.537
glcE
Probable glycolate oxidase subunit GlcE. Homology to glcE of E. coli of 47% (sprot|GLCE_ECOLI) InterPro: FAD linked oxidase N-terminal (IPR006093) Pfam: FAD binding domain Tigrfam: glcD: glycolate oxidase subunit GlcD no singla peptide no TMHs; High confidence in function and specificity.
  
     0.515
dedA
DedA family protein, 57% identity(75% similarity) to TrEMBL;Q88QF4. TrEMBl;Q889M5(57% identity). SwissProt;P09548(55% identity) Has PF00597, DedA family;IPR000252;This family combines the DedA related proteins and YIAN/YGIK family. Members of this family are not functionally characterised. These proteins contain multiple predicted transmembrane regions; High confidence in function and specificity.
  
  
 0.470
relA
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.462
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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