Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| azo1234 | rpoN2 | azo1234 | azo1790 | Probable ranscriptional regulator,; Specificity unclear. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.863 |
| azo3031 | poxR | azo3031 | azo2446 | Probable transcriptional regulatory protein,; Specificity unclear. | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | 0.599 |
| azo3031 | rpoN2 | azo3031 | azo1790 | Probable transcriptional regulatory protein,; Specificity unclear. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.812 |
| pilR | poxR | azo3356 | azo2446 | Two component system response regulator,; High confidence in function and specificity. | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | 0.611 |
| pilR | rpoN2 | azo3356 | azo1790 | Two component system response regulator,; High confidence in function and specificity. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.911 |
| poxR | azo3031 | azo2446 | azo3031 | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | Probable transcriptional regulatory protein,; Specificity unclear. | 0.599 |
| poxR | pilR | azo2446 | azo3356 | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | Two component system response regulator,; High confidence in function and specificity. | 0.611 |
| poxR | pspF | azo2446 | azo2328 | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | Probable transcriptional regulator,; Specificity unclear. | 0.565 |
| poxR | rpoN2 | azo2446 | azo1790 | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.822 |
| poxR | yfhA | azo2446 | azo2770 | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | Putative two component transcriptional regulator,; Conserved hypothetical protein. | 0.604 |
| pspF | poxR | azo2328 | azo2446 | Probable transcriptional regulator,; Specificity unclear. | Probable positive regulator of phenol-degratives genes; Transcriptional regulatory protein probable involved into the phenol degradation pathway,; High confidence in function and specificity. | 0.565 |
| pspF | rpoN2 | azo2328 | azo1790 | Probable transcriptional regulator,; Specificity unclear. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.812 |
| rpoA | rpoB | azo3391 | azo3424 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoC | azo3391 | azo3423 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoN2 | azo3391 | azo1790 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.899 |
| rpoA | rpoZ | azo3391 | azo3952 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.998 |
| rpoB | rpoA | azo3424 | azo3391 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoC | azo3424 | azo3423 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoN2 | azo3424 | azo1790 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.893 |
| rpoB | rpoZ | azo3424 | azo3952 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.995 |
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