Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
azo1872Hypothetical phage tail tape measure protein. Controls phage tail length no signal peptide. no TMH. (770 aa)    
Predicted Functional Partners:
azo1873
Hypothetical protein, 26% Identity to TrEMBL;Q9PFZ1. No domains, repeats, motifs or features could be predicted above threshold.
       0.779
azo1871
Hypothetical protein.
       0.773
azo3973
Hypothetical protein. no homology of the entire protein to the data bank. Pfam: putative peptidoglycan binding domain. This domain, peptidoglycan binding domain 1, may have a general peptidoglycan binding function. It is composed of three alpha helices and is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. no signal peptide. no TMHs.
  
  
 0.750
azo1301
Hypothetical membrane protein. No homology of the entire protein with the data bank. Pfam: D-alanyl-D-alanine carboxypeptidase (101-209 aa) no signal peptide 1 TMHs.
  
  
 0.711
azo1870
Endopeptidase Clp; Putative protease encoded ATP-dependent Clp protease family protein similar(30 Identity,45% similarity in function) to TrEMBL:Q8X866. IPR001907. Has pfam00574,CLP_protease, Clp protease. The Clp protease has an active site catalytic triad. In E. coli Clp protease, ser-111,his-136 and asp-185 form the catalytic triad. One member has lost all of these active site residues and is therefore inactive. Some members contain one or two large insertions. Peptidase family S49 domain present. Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a [...]
  
    0.652
azo2141
Conserved hypothetical secreted protein. Homology to CV2523 of Chromobacterium violaceum of 48% (trembl:Q7NV23). Pfam: NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. Signal peptide. No TMHs; Conserved hypothetical protein.
  
 
 0.611
azo2203
Putative lipoprotein precusor; InterPro: NLP/P60; Family membership.
  
 
 0.611
azo0098
Conseved hypothetical membrane protein. Homology to RSO2271 of R. solanacearum of 36% (trembl|Q8Y3B1(SRS)). Pfam: Lysin motif (SM00257) This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. No signal peptide 1 TMH; Conserved hypothetical protein.
   
   0.592
azo3770
Conserved hypothetical protein, 43% identity (60% similarity) to TrEMBL; Q8ZML9. TrEMBL;Q8X937(44% identity to Escherichia coli) Has PF04972, Putative phospholipid-binding domain;IPR007055, TAD; This domain is found in a family of osmotic shock protection proteins (e.g. P27291). It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. Has SMART;SM00257,LysM, Lysin motif:IPR002482; This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation. This domain [...]
   
   0.592
azo1868
Hypothetical protein, very weak homology with hits in the Database. No Motifs,domains, or Signal peptide present.
       0.497
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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