Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| azo1940 | azo1942 | azo1940 | azo1942 | Conserved hypothetical membrane protein. Homology to PP4294 of P. putida of 67% (trembl|Q88F06). Has PF05661, Protein of unknown function (DUF808);IPR008526;This family consists of several bacterial proteins of unknown function. no signal peptide. 5 TMHs; Conserved hypothetical protein. | Hypothetical secreted protein. No good homology with hits in the database. No domains predicted. Signal peptide present. No TMHs. | 0.453 |
| azo1940 | gdhAlpha2 | azo1940 | azo1941 | Conserved hypothetical membrane protein. Homology to PP4294 of P. putida of 67% (trembl|Q88F06). Has PF05661, Protein of unknown function (DUF808);IPR008526;This family consists of several bacterial proteins of unknown function. no signal peptide. 5 TMHs; Conserved hypothetical protein. | Putative glucose dehydrogenase alpha subunit. Homology to gdhAlpha of B. cepacia of 28% (trembl|Q8GQE7). InterPro: NAD binding site (IPR000205); UBA/THIF-type NAD/FAD binding fold (IPR000594), $Fe-4s ferredoxin, ion-sulfur binding domain (IPR001450) Pfam: GMC oxidoreductase no signal peptide no TMHs gid: gid protein; Function unclear. | 0.453 |
| azo1940 | mltG | azo1940 | azo1594 | Conserved hypothetical membrane protein. Homology to PP4294 of P. putida of 67% (trembl|Q88F06). Has PF05661, Protein of unknown function (DUF808);IPR008526;This family consists of several bacterial proteins of unknown function. no signal peptide. 5 TMHs; Conserved hypothetical protein. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.509 |
| azo1942 | azo1940 | azo1942 | azo1940 | Hypothetical secreted protein. No good homology with hits in the database. No domains predicted. Signal peptide present. No TMHs. | Conserved hypothetical membrane protein. Homology to PP4294 of P. putida of 67% (trembl|Q88F06). Has PF05661, Protein of unknown function (DUF808);IPR008526;This family consists of several bacterial proteins of unknown function. no signal peptide. 5 TMHs; Conserved hypothetical protein. | 0.453 |
| azo1942 | gdhAlpha2 | azo1942 | azo1941 | Hypothetical secreted protein. No good homology with hits in the database. No domains predicted. Signal peptide present. No TMHs. | Putative glucose dehydrogenase alpha subunit. Homology to gdhAlpha of B. cepacia of 28% (trembl|Q8GQE7). InterPro: NAD binding site (IPR000205); UBA/THIF-type NAD/FAD binding fold (IPR000594), $Fe-4s ferredoxin, ion-sulfur binding domain (IPR001450) Pfam: GMC oxidoreductase no signal peptide no TMHs gid: gid protein; Function unclear. | 0.783 |
| gdhAlpha2 | azo1940 | azo1941 | azo1940 | Putative glucose dehydrogenase alpha subunit. Homology to gdhAlpha of B. cepacia of 28% (trembl|Q8GQE7). InterPro: NAD binding site (IPR000205); UBA/THIF-type NAD/FAD binding fold (IPR000594), $Fe-4s ferredoxin, ion-sulfur binding domain (IPR001450) Pfam: GMC oxidoreductase no signal peptide no TMHs gid: gid protein; Function unclear. | Conserved hypothetical membrane protein. Homology to PP4294 of P. putida of 67% (trembl|Q88F06). Has PF05661, Protein of unknown function (DUF808);IPR008526;This family consists of several bacterial proteins of unknown function. no signal peptide. 5 TMHs; Conserved hypothetical protein. | 0.453 |
| gdhAlpha2 | azo1942 | azo1941 | azo1942 | Putative glucose dehydrogenase alpha subunit. Homology to gdhAlpha of B. cepacia of 28% (trembl|Q8GQE7). InterPro: NAD binding site (IPR000205); UBA/THIF-type NAD/FAD binding fold (IPR000594), $Fe-4s ferredoxin, ion-sulfur binding domain (IPR001450) Pfam: GMC oxidoreductase no signal peptide no TMHs gid: gid protein; Function unclear. | Hypothetical secreted protein. No good homology with hits in the database. No domains predicted. Signal peptide present. No TMHs. | 0.783 |
| mltG | azo1940 | azo1594 | azo1940 | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Conserved hypothetical membrane protein. Homology to PP4294 of P. putida of 67% (trembl|Q88F06). Has PF05661, Protein of unknown function (DUF808);IPR008526;This family consists of several bacterial proteins of unknown function. no signal peptide. 5 TMHs; Conserved hypothetical protein. | 0.509 |