STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1949Putative AraC-family transcriptional regulator,; Family membership. (341 aa)    
Predicted Functional Partners:
azo3019
Putative AraC family,transcriptional regulator, 28% Identity to TrEMBL;Q62GH5,Q6QEJ0,Q9HWT4 Has SMART;SM00342,HTH_ARAC, helix_turn_helix, arabinose operon control protein;IPR000005; Many bacterial transcription regulation proteins bind DNA through a 'helix-turn-helix' (HTH) motif. One major subfamily of these proteins is related to the arabinose operon regulatory protein AraC. Except for celD all of these proteins seem to be positive transcriptional factors.Although the sequences belonging to this family differ somewhat in length, in nearly every case the HTH motif is situated towards [...]
  
     0.696
azo1981
Conserved hypothetical indolepyruvate ferredoxin oxidoreductase, beta subunit. Homology to rsc1828 of R. solanacearum of 53% (trembl|Q8XYD0). Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase. no signal peptide. no TMHs; Conserved hypothetical protein.
  
  
  0.653
styA
Putative styrene monooxygenase. Homology to styA of P. fluorescens of 25% (TREMBL:O06834) Encode a styrene monooxygenase responsible for the transformation of styrene to epoxystyrene Pfam: FAD binding domain no signal peptide no TMHs; Family membership.
  
     0.650
azo1963
Conserved Hypothetical protein has strong similarity 70% and 51% identity to PUTATIVE OXYGENASE SUBUNIT PROTEIN [Ralstonia solanacearum GMI1000],TrEMBL:Q8XYC1, which has IPR003042; Rng_mnoxygenase and IPR001327; FAD_pyr_redox domain which is absent in this case. No Signal peptide or TMH being reported as present; Function unclear.
  
     0.640
azo1978
Conserved hypothetical protein; TREMBL:Q89PP9: 66% identity, 79% similarity. InterPro:IPR007325; Cyclase. Pfam:PF04199; Cyclase No signal peptide present. Absence of trans-membrane helices (TMHMM predicted); Function unclear.
  
     0.634
azo1988
Conserved hypothetical protein; TREMBL:Q8XYC3: 64% identity, 75% similarity Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form a part of the active site. InterPro:IPR007325; Cyclase. Pfam: PF04199; Cyclase Absence of signal peptide. Absence of transmembrane helices; Function unclear.
  
     0.627
gltB
Ferredoxin-dependent glutamate synthase,; Specificity unclear.
    
  0.615
rpoA
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.556
azo1935
Putative MarR-family transcriptional regulator,; Family membership.
  
    0.547
azo1986
Conserved hypothetical protein; Entry name TREMBL:Q89PQ1 Prim. accession # Q89PQ1 Identities = 241/381 (63%) Thiolase, N-terminal domain (Pfam predicted) Prediction: Non-secretory protein Signal peptide probability: 0.00 Number of predicted TMHs: 0.
  
  
  0.507
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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