STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo1963Conserved Hypothetical protein has strong similarity 70% and 51% identity to PUTATIVE OXYGENASE SUBUNIT PROTEIN [Ralstonia solanacearum GMI1000],TrEMBL:Q8XYC1, which has IPR003042; Rng_mnoxygenase and IPR001327; FAD_pyr_redox domain which is absent in this case. No Signal peptide or TMH being reported as present; Function unclear. (409 aa)    
Predicted Functional Partners:
azo1962
Conserved hypothetical flavin reductase. Homology to rsc0763 of R. solanacearum of 43% (TREMBL:Q8Y1C7). Pfam: Flavin reductase like domain. This is a flavin reductase family consisting of enzymes known to be flavin reductases as well as various oxidoreductase and monooxygenase components. no signal peptide. no TMHs; Conserved hypothetical protein.
  
 0.865
azo1964
Putative AraC-family transcriptional regulator,; Family membership.
 
     0.798
azo1965
Putative AraC-family transcriptional regulator,; Family membership.
 
     0.723
azo1937
The short-chain dehydrogenases/reductases family (SDR) is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases,TREMBL:Q9AQN5 (39% identity); TREMBL:Q987X7 (35% identity). InterPro (IPR002198): Short-chain dehydrogenase/reductase (SDR). InterPro (IPR002347): Glucose/ribitol dehydrogenase. Pfam (PF00106): Short chain dehydrogenase; Specificity unclear.
  
 
   0.666
azo1936
Putative AraC-family transcriptional regulator,; Family membership.
  
     0.664
azo1945
Putative AraC-family transcriptional regulator,; Family membership.
  
     0.649
crtI
Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene desaturase). Phytoene dehydrogenase (phytoene desaturase) is an enzyme of carotenoid biosynthesis that converts phytoene into zeta-carotene via the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene, TREMBL:Q8XYC4 (50% identity); SWISSPROT:P06108 (26% identity). InterPro (IPR008150): Bacterial-type phytoene dehydrogenase Pfam (Phytoene_dh): Phytoene dehydrogenase related enzyme; High confidence in function and specificity.
 
 
 0.645
azo1949
Putative AraC-family transcriptional regulator,; Family membership.
  
     0.640
etf1
Probable electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.627
etf2
Probable electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.627
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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