STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2083Conserved hypothetical protein. Homology to RS02847 of R.solanacearum of 49% (trembl:Q8XZS0). Has PF04635,Protein of unknown function, DUF598;IPR006729; This family contains several uncharacterised proteins. No signal peptide or TMH present. (126 aa)    
Predicted Functional Partners:
azo1506
Conserved hypothetical protein. Homology to CV2476 of C.violaceum of 38% (tremble:Q7NV68) No domains predicted. No signal peptide or TMH present.
 
     0.688
azo1434
Hypothetical protein similar by 78% to RSc1001 [RS04291] [Ralstonia solanacearum(Pseudomonas solanacearum)].TrEMBL Q8Y0P2. No Signal Peptide Reported No TMH Reported.
  
     0.678
bioC2
Putative biotin synthesis protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
  
     0.676
azo0487
Conserved hypothetical protein. Homology to NE1166 of N.europaea of 49% (tremble:Q82VC8) Has PF02636,Uncharacterized ACR, COG1565;IPR003788, DUF185; This family contains several uncharacterised proteins. Q8YI87 has been described as an ATP synthase beta subunit transcription termination factor rho protein. No signal peptide. No TMHs.
  
     0.660
yfbQ
Aspartate aminotransferase is important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism. The enzyme catalyses the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate Similar to trembl|Q8XZR9 (72%),to trembl|Q9RAN0 (62%) and to sprot|YFBQ_ECOLI (57%). Pfam (PF00155): Aminotransferases class-I; Specificity unclear.
       0.548
azo2776
Hypothetical protein, 47% identity to TrEMBL;Q7NW97,TrEMBL;Q7VTV4(56% identity). No domains,repeats, motifs or features present; Function unclear.
  
     0.537
hom
Homoserine dehydrogenase catalyzes NAD-dependent reduction of aspartate beta-semialdehyde into homoserine. This reaction is the third step in a pathway leading from aspartate to homoserine. Similar to TREMBL:Q9RAM9 (77%) and to pir|DEPSHA(PIR (Georgetown University) (56%). Pfam: Homoserine dehydrogenase; High confidence in function and specificity.
       0.499
azo1577
Conserved hypothetical protein; Entry name TREMBL:Q8XZH0 Prim. accession # Q8XZH0 InterPro :- IPR005340; UPF0083. Pfam PF03654; ARPF; 1. Identities = 78/142 (54%), Number of predicted TMHs: 0 Prediction: Non-secretory protein Signal peptide probability: 0.000.
  
     0.480
bioC1
Biotin synthesis protein bioC. bioc is involved in an early, but chemically unexplored, step in the conversion of pimelic acid to biotin; Specificity unclear.
  
     0.431
nuoG
Putative NADH-ubiquinone oxidoreductase chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
     0.417
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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