STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sltSoluble lytic murein transglycosylase precursor (EC 3.2.1.-) (Slt70). Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division (By similarity). flhB_rel: FlhB domain protein; Family membership. (231 aa)    
Predicted Functional Partners:
azo3349
Putative transglycosylase; Similar to phage protein P7. InterPro: SLT domain; Family membership.
  
     0.558
gspG2
General secretion pathway GSPG-related transmembrane protein,; Specificity unclear.
       0.548
azo2099
Conserved hypothetical secreted protein. Homology to xac2776 of X. axonopodis of 50% (trembl|Q8PIW9). Pfam: DUF839 This family consists of several bacterial proteins of unknown function. signal peptide. no TMHs; Conserved hypothetical protein.
       0.517
motB1
Flagellar motor protein MotB (Chemotaxis motB protein. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque-generating machinery to the cell wall. Pfam: OmpA family no signal peptide probable 1 TMH; High confidence in function and specificity.
 
    0.510
azo2092
Conserved hypothetical membrane protein. Homology to ebA1234 of Azoarcus sp. EbN1 of 38% (gnl|keqq|eba:ebA1234(KEGG)). no domains predicted. no signal peptide. 1 TMH; Conserved hypothetical protein.
       0.508
azo2203
Putative lipoprotein precusor; InterPro: NLP/P60; Family membership.
 
   
 0.495
azo2091
Conserved hypothetical secreted protein. Homology to rs02976 of R. solanacearum of 35% (trembl|Q8XTG7(SRS)). No domains predicted. Signal peptide present. no TMHs; Conserved hypothetical protein.
       0.482
gspF2
General secretion pathway protein F,similar trembl|Q88HD6 (39%). The general (type II) secretion pathway (GSP) within Gram-negative bacteria is a signal sequence-dependent process responsible for protein export. The process has two stages: exoproteins are first translocated across the inner membrane by the general signal-dependent export pathway (GEP), and then across the outer membrane by a species-specific accessory mechanism. InterPro (IPR001992): Bacterial type II secretion system protein. InterPro (IPR003004): Bacterial general secretion pathway protein F Pfam (PF00482): Bacterial [...]
       0.472
azo2086
Putative transcriptional activator protein,; Function unclear.
       0.471
xcmX
Putative Gsp-related pathway protein; In Pseudomonas putida strain GB-1, XcmX is involved in a novel Xcp-related system for the transport of manganese-oxidizing enzymes to the cell surface. Similar trembl|Q8KSG3 (33%). TMHMM reporting one TMH. SignalP reporting a signal peptid; Function unclear.
       0.471
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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