Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
azo2114Conserved hypothetical protein; InterPro: Sua5/YciO/YrdC/YwlC protein family TIGR00057: Sua5/YciO/YrdC/YwlC family p; High confidence in function and specificity; Belongs to the SUA5 family. (210 aa)    
Predicted Functional Partners:
trpH
Conserved hypothetical protein; TREMBL:Q7VZ25: 48% identity; 57% similarity SWISSPROT:TRPH_HAEIN:Protein trpH (38% identity). InterPro:IPR003141; PHP_N.PHP domain C-terminal region. The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region Pfam: PF02231; PHP_N; SMART: SM00481; POLIIIAc; thiE: thiamine-phosphate pyrophosphoryl; High confidence in function and specificity.
  
    0.865
azo2116
Probable Serine hydrolase-like protein (EC 3.1.-.-). TREMBL:Q8Y0A9: 49% identity, 63% similarity. Pfam: abhydrolase; thioesterase TIGRFAM: murB: UDP-N-acetylenolpyruvoylglucosamine No transmembrane helix (predicted by TMHMM); Function unclear.
 
     0.823
azo2113
Conserved hypothetical membrane protein. Homology to NE1726 of N.europaea of 61% (trembl:Q82TY8). InterPro: IPR008915; Peptidase_M50. Pfam: PF02163; Peptidase_M50. Non-secretory protein signal peptide probability: 0.235. TMHMM predicted 4 transmembrane helices; Conserved hypothetical protein.
  
    0.695
gcp
Probable O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.633
azo2110
Pseudouridylate synthase; Conserved hypothetical protein; Family membership; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.632
azo2112
Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.625
scpB
Putative segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.619
azo2117
Hypothetical protein. Very bad homology with hits. Has No domains, repeats, motifs or features detected.
       0.568
trmB
Conserved hypothetical tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
  
 0.512
azo2118
Conserved hypothetical protein. Very Bad homology with hits in the database. Has SMART;SM00438;IPR000967,Znf_NFX1;This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger: C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C, where X can be any amino acid, and numbers in brackets indicate the number of residues. The two position can be either his or cys. This domain is found in the human transcriptional repressor NK-X1, a repressor of HLA-DRA transcription; the Drosophila shuttle craft protein, which plays an essential role during the late stages [...]
       0.442
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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