STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2152Hypothetical secreted protein. Homology to GSU2347 of G. sulfurreducens of 26% (tremblnew|AAR35721(SRS)). Has PF04338;Protein of unknown function, DUF481; This family includes several proteins of uncharacterised function. Signal P reporting signal peptide present. NO TMH reported to be present. (345 aa)    
Predicted Functional Partners:
azo2153
Conserved hypothetical secreted protein. Homology to PP2380 of P. putida of 47% (trembl:Q88KB0). Has PF04314, Protein of unknown function (DUF461);Putative membrane or periplasmic protein. Signal peptide present. No TMH reported present; Conserved hypothetical protein.
       0.500
azo0275
Conserved hypothetical secreted protein. Homology to CC3220 of Caulobacter crescentus of 34% (trembl|Q9A3I4(SRS)) No domains predicted. Signal Peptide present. NO TMH present; Conserved hypothetical protein.
  
     0.451
azo2154
Conserved hypothetical secreted protein. 33% similarity to TrEMBL Q8XQF8 PROBABLE SIGNAL PEPTIDE PROTEIN [RS05314] [Ralstonia solanacearum (Pseudomonas solanacearum)]. No domains predicted. Signal P reporting signal peptide present. No TMH reported being present; Conserved hypothetical protein.
       0.416
azo2155
Conserved hypothetical secreted protein. Homology to rsc1270 of R. solanacearum of 44% (trembl|Q8XQF7(SRS)). no domains predicted .signal peptide present. no TMHs; Conserved hypothetical protein.
       0.416
azo2156
TonB-dependent outer membrane receptor involved in the first step of iron internalization and metabolism. A short conserved region so called the tonB-box is present in the sequence. This domain is involved in the interaction of the receptor with the TonB protein. Similar to a E. coli iron(III) dicitrate transport protein fecA precursor. InterPro: TonB-dependent receptor protein arcC: carbamate kinase; Function unclear.
       0.416
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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